Identifying protein-coding genes in genomic sequences.

Jennifer Harrow, Alinda Nagy, Alexandre Reymond, Tyler Alioto, L. Patthy, Stylianos E. Antonarakis, Roderic Guigó

Research output: Article

50 Citations (Scopus)

Abstract

The vast majority of the biology of a newly sequenced genome is inferred from the set of encoded proteins. Predicting this set is therefore invariably the first step after the completion of the genome DNA sequence. Here we review the main computational pipelines used to generate the human reference protein-coding gene sets.

Original languageEnglish
Pages (from-to)201
Number of pages1
JournalGenome Biology
Volume10
Issue number1
Publication statusPublished - 2009

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genomics
genome
Genome
protein
gene
Proteins
genes
proteins
nucleotide sequences
DNA
Biological Sciences

ASJC Scopus subject areas

  • Genetics

Cite this

Harrow, J., Nagy, A., Reymond, A., Alioto, T., Patthy, L., Antonarakis, S. E., & Guigó, R. (2009). Identifying protein-coding genes in genomic sequences. Genome Biology, 10(1), 201.

Identifying protein-coding genes in genomic sequences. / Harrow, Jennifer; Nagy, Alinda; Reymond, Alexandre; Alioto, Tyler; Patthy, L.; Antonarakis, Stylianos E.; Guigó, Roderic.

In: Genome Biology, Vol. 10, No. 1, 2009, p. 201.

Research output: Article

Harrow, J, Nagy, A, Reymond, A, Alioto, T, Patthy, L, Antonarakis, SE & Guigó, R 2009, 'Identifying protein-coding genes in genomic sequences.', Genome Biology, vol. 10, no. 1, pp. 201.
Harrow J, Nagy A, Reymond A, Alioto T, Patthy L, Antonarakis SE et al. Identifying protein-coding genes in genomic sequences. Genome Biology. 2009;10(1):201.
Harrow, Jennifer ; Nagy, Alinda ; Reymond, Alexandre ; Alioto, Tyler ; Patthy, L. ; Antonarakis, Stylianos E. ; Guigó, Roderic. / Identifying protein-coding genes in genomic sequences. In: Genome Biology. 2009 ; Vol. 10, No. 1. pp. 201.
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