• 2156 Citations
  • 24 h-Index
1992 …2019

Research output per year

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Research Output

  • 2156 Citations
  • 24 h-Index
  • 67 Article
2015

Phenylalanine Ammonia-Lyase-Catalyzed Deamination of an Acyclic Amino Acid: Enzyme Mechanistic Studies Aided by a Novel Microreactor Filled with Magnetic Nanoparticles

Weiser, D., Bencze, L. C., Bánõczi, G., Ender, F., Kiss, R., Kõkai, E., Szilágyi, A., Vértessy, B. G., Farkas, Ö., Paizs, C. & Poppe, L., nov. 1 2015, In : ChemBioChem. 16, 16, p. 2283-2288 6 p.

Research output: Article

24 Citations (Scopus)
2013
2 Citations (Scopus)
2012
6 Citations (Scopus)
25 Citations (Scopus)
2011
21 Citations (Scopus)
2009

Mechanism for the oxidation of Sulfides And sulfoxides with periodates: Reactivity of the oxidizing species

Ruff, F., Fabian, A., Farkas, O. & Kucsman, A., máj. 1 2009, In : European Journal of Organic Chemistry. 13, p. 2102-2111 10 p.

Research output: Article

21 Citations (Scopus)

Parameter-free linear relationship (PFLR) and its application to 3D QSAR

Farkas, Ö., Jákli, I., Kalászi, A. & Imre, G., márc. 1 2009, In : Journal of Mathematical Chemistry. 45, 3, p. 598-606 9 p.

Research output: Article

2 Citations (Scopus)
2008
23 Citations (Scopus)

Antibody recognition and conformational flexibility of a plaque-specific β-amyloid epitope modulated by non-native peptide flanking regions

Manea, M., Kalászi, A., Mezo, G., Horváti, K., Bodor, A., Horváth, A., Farkas, Ö., Perczel, A., Przybylski, M. & Hudecz, F., márc. 13 2008, In : Journal of Medicinal Chemistry. 51, 5, p. 1150-1161 12 p.

Research output: Article

7 Citations (Scopus)
28 Citations (Scopus)
2007

Identification of the bioactive conformation for mucin epitope peptides

Kalaszi, A., Imre, G., Jakli, I. & Farkas, O., dec. 1 2007, In : Journal of Molecular Structure: THEOCHEM. 823, 1-3, p. 16-27 12 p.

Research output: Article

2 Citations (Scopus)
2006
16 Citations (Scopus)
22 Citations (Scopus)
2005

Vibrations-determined properties of green fluorescent protein

Krasnenko, V., Tkaczyk, A. H., Tkaczyk, E. R., Farkas, Ö. & Mauring, K., jún. 15 2005, In : Biopolymers. 78, 3, p. 140-146 7 p.

Research output: Article

3 Citations (Scopus)
2003

Generation and analysis of the conformational potential energy surfaces of N-acetyl-N-methyl-L-alanine-N′-methylamide. An exploratory ab initio study

Bágyi, I., Balogh, B., Czajlik, A., Éliás, O., Gáspári, Z., Gergely, V., Hudáky, I., Hudáky, P., Kalászi, A., Károlyházy, L., Keserû, K., Kiss, R., Krajsovszky, G., Láng, B., Nagy, T., Rácz, Á., Szentesi, A., Tábi, T., Tapolcsányi, P., Vaik, J. & 5 others, Koo, J. C. P., Chass, G. A., Farkas, Ö., Perczel, A. & Mátyus, P., máj. 5 2003, In : Journal of Molecular Structure: THEOCHEM. 625, 1-3, p. 121-136 16 p.

Research output: Article

12 Citations (Scopus)

Geometry optimization methods for modeling large molecules

Farkas, Ö. & Schlegel, H. B., dec. 29 2003, In : Journal of Molecular Structure: THEOCHEM. 666-667, p. 31-39 9 p.

Research output: Article

19 Citations (Scopus)

Geometry optimization with QM/MM, ONIOM, and other combined methods. I. Microiterations and constraints

Vreven, T., Morokuma, K., Farkas, Ö., Schlegel, H. B. & Frisch, M. J., ápr. 30 2003, In : Journal of Computational Chemistry. 24, 6, p. 760-769 10 p.

Research output: Article

467 Citations (Scopus)

Lead conformer prediction based on a library of flexible molecules

Kalászi, A. & Farkas, Ö., dec. 29 2003, In : Journal of Molecular Structure: THEOCHEM. 666-667, p. 645-649 5 p.

Research output: Article

4 Citations (Scopus)

Molecules from the Minkowski space: An approach to building 3D molecular structures

Imre, G., Veress, G., Volford, A. & Farkas, Ö., dec. 29 2003, In : Journal of Molecular Structure: THEOCHEM. 666-667, p. 51-59 9 p.

Research output: Article

19 Citations (Scopus)
2002

Ab initio quantum mechanical characterization of platinum, palladium, and nickel complexes of L-ascorbic acid

Chass, G. A., Sahai, M. A., Law, J. M. S., Lovas, S., Farkas, Ö., Perczel, A., Rivail, J. L. & Csizmadia, I. G., okt. 15 2002, In : International Journal of Quantum Chemistry. 90, 2, p. 882-887 6 p.

Research output: Article

1 Citation (Scopus)
14 Citations (Scopus)
114 Citations (Scopus)
13 Citations (Scopus)
34 Citations (Scopus)
84 Citations (Scopus)
6 Citations (Scopus)

Peptide model XXVIII: An exploratory ab initio and density functional study on the side-chain-backbone interaction in N-acetyl-L-cysteine-N-methylamide and N-formyl-L-cysteinamide in their γL-backbone conformations

Zamora, M. A., Baldoni, H. A., Rodriguez, A. M., Enriz, R. D., Sosa, C. P., Perczel, A., Kucsman, A., Farkas, O., Deretey, E., Vank, J. C. & Csizmadia, I. G., szept. 18 2002, In : Canadian Journal of Chemistry. 80, 7, p. 832-844 13 p.

Research output: Article

14 Citations (Scopus)
2001

An ab initio exploratory study of side chain conformations for selected backbone conformations of N-acetyl-L-glutamine-N-methylamide

Tarditi, A. M., Klipfel, M. W., Rodriguez, A. M., Suvire, F. D., Chasse, G. A., Farkas, O., Perczel, A. & Enriz, R. D., júl. 9 2001, In : Journal of Molecular Structure: THEOCHEM. 545, 1-3, p. 29-47 19 p.

Research output: Article

21 Citations (Scopus)

An exploratory study of side-chain-backbone interaction in selected conformations of N-acetyl-L-glutamate-N-methylamide. An ab initio study

Masman, M. F., Amaya, M. G., Rodríguez, A. M., Suvire, F. D., Chasse, G. A., Farkas, O., Perczel, A. & Enriz, R. D., jún. 22 2001, In : Journal of Molecular Structure: THEOCHEM. 543, 1-3, p. 203-222 20 p.

Research output: Article

16 Citations (Scopus)

Can NO2+ exist in bent or cyclic forms?

Füzéry, A. K., Burcl, R., Torday, L. L., Császár, P., Farkas, O., Perczel, A., Zamora, M. A., Papp, J. G., Penke, B., Piecuch, P. & Csizmadia, I. G., febr. 9 2001, In : Chemical Physics Letters. 334, 4-6, p. 381-386 6 p.

Research output: Article

3 Citations (Scopus)

C-N rotational barriers in aromatically substituted styrylformamides: An AM1 study utilizing the conductor like screening model for real solvents

Zamora, M. A., Baldoni, H. A., Bombasaro, J. A., Mak, M. L., Perczel, A., Farkas, O. & Enriz, R. D., máj. 4 2001, In : Journal of Molecular Structure: THEOCHEM. 540, p. 47-52 6 p.

Research output: Article

2 Citations (Scopus)
20 Citations (Scopus)
2000
23 Citations (Scopus)

Geometry Optimization of Kringle 1 of Plasminogen Using the PM3 Semiempirical Method

Daniels, A. D., Scuseria, G. E., Farkas, Ö. & Schlegel, H. B., márc. 5 2000, In : International Journal of Quantum Chemistry. 77, 1, p. 82-89 8 p.

Research output: Article

8 Citations (Scopus)

Peptide models XXIX. cis-trans Isomerism of peptide bonds: Ab initio study on small peptide model compound; the 3D-Ramachandran map of formylglycinamide

Baldoni, H. A., Zamarbide, G. N., Enriz, R. D., Jauregui, E. A., Farkas, Ö., Perczel, A., Salpietro, S. J. & Csizmadia, I. G., ápr. 3 2000, In : Journal of Molecular Structure: THEOCHEM. 500, 1-3, p. 97-111 15 p.

Research output: Article

36 Citations (Scopus)
32 Citations (Scopus)

Prospects in computational Molecular Medicine: A Millennial Mega-project on peptide folding

Berg, M. A., Chasse, G. A., Deretey, E., Füzéry, A. K., Fung, B. M., Fung, D. Y. K., Henry-Riyad, H., Lin, A. C., Mak, M. L., Mantas, A., Patel, M., Repyakh, I. V., Staikova, M., Salpietro, S. J., Tang, T. H., Vank, J. C., Perczel, A., Csonka, G. I., Farkas, Ö., Torday, L. L. & 2 others, Székely, Z. & Csizmadia, I. G., ápr. 3 2000, In : Journal of Molecular Structure: THEOCHEM. 500, 1-3, p. 5-58 54 p.

Research output: Article

33 Citations (Scopus)
22 Citations (Scopus)
1999

Methods for optimizing large molecules. II. Quadratic search

Farkas, Ö. & Schlegel, H. B., dec. 22 1999, In : Journal of Chemical Physics. 111, 24, p. 10806-10814 9 p.

Research output: Article

161 Citations (Scopus)

Peptide models XXIV: An ab initio study on N-formyl-L-prolinamide with trans peptide bond. The existence or non-existence of α(L) and ε(L) conformations

Baldoni, H. A., Rodriguez, A. M., Zamora, M. A., Zamarbide, G. N., Enriz, R. D., Farkas, Ö., Csàszàr, P., Torday, L. L., Sosa, C. P., Jàkli, I., Perzel, A., Papp, J. G., Hollosi, M. & Csizmadia, I. G., máj. 31 1999, In : Journal of Molecular Structure: THEOCHEM. 465, 1, p. 79-91 13 p.

Research output: Article

53 Citations (Scopus)
1998

Characteristics of Ramachandran maps of L-alanine diamides as computed by various molecular mechanics, semiempirical and ab initio MO methods. A search for primary standard of peptide conformational stability

Rodríguez, A. M., Baldoni, H. A., Suvire, F., Vázquez, R. N., Zamarbide, G., Enriz, R. D., Farkas, Ö., Perczel, A., McAllister, M. A., Torday, L. L., Papp, J. G. & Csizmadia, I. G., dec. 18 1998, In : Journal of Molecular Structure: THEOCHEM. 455, 2-3, p. 275-301 27 p.

Research output: Article

32 Citations (Scopus)
58 Citations (Scopus)
17 Citations (Scopus)
45 Citations (Scopus)
66 Citations (Scopus)