• 42355 Citations
  • 76 h-Index
1991 …2019
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Research Output 1991 2019

  • 42355 Citations
  • 76 h-Index
  • 177 Article
  • 28 Conference contribution
  • 1 Comment/debate
  • 1 Letter
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Article
2019

StePS: A multi-GPU cosmological N-body Code for compactified simulations

Rácz, G., Szapudi, I., Dobos, L., Csabai, I. & Szalay, A. S., júl. 1 2019, In : Astronomy and Computing. 28, 100303.

Research output: Article

Geometry
simulation
Topology
Boundary conditions
Data storage equipment

The genomic imprint of cancer therapies helps timing the formation of metastases

Németh, E., Krzystanek, M., Reiniger, L., Ribli, D., Pipek, O., Sztupinszki, Z., Glasz, T., Csabai, I., Moldvay, J., Szallasi, Z. & Szüts, D., jan. 1 2019, In : International Journal of Cancer.

Research output: Article

Open Access
Neoplasm Metastasis
Mutation
Neoplasms
Cisplatin
Therapeutics

Worldwide human mitochondrial haplogroup distribution from urban sewage

Pipek, O. A., Medgyes-Horváth, A., Dobos, L., Stéger, J., Szalai-Gindl, J., Visontai, D., Kaas, R. S., Koopmans, M., Hendriksen, R. S., Aarestrup, F. M. & Csabai, I., dec. 1 2019, In : Scientific reports. 9, 1, 11624.

Research output: Article

Open Access
mitochondrial DNA
sewage
census
genotype
distribution
2018
14 Citations (Scopus)

A Somatically Acquired Enhancer of the Androgen Receptor Is a Noncoding Driver in Advanced Prostate Cancer

Takeda, D. Y., Spisák, S., Seo, J. H., Bell, C., O'Connor, E., Korthauer, K., Ribli, D., Csabai, I., Solymosi, N., Szállási, Z., Stillman, D. R., Cejas, P., Qiu, X., Long, H. W., Tisza, V., Nuzzo, P. V., Rohanizadegan, M., Pomerantz, M. M., Hahn, W. C. & Freedman, M. L., jan. 1 2018, (Accepted/In press) In : Cell.

Research output: Article

Androgen Receptors
Prostatic Neoplasms
Genes
Epigenomics
Amplification
5 Citations (Scopus)

Breast cancer brain metastases show increased levels of genomic aberration-based homologous recombination deficiency scores relative to their corresponding primary tumors

Diossy, M., Reiniger, L., Sztupinszki, Z., Krzystanek, M., Timms, K. M., Neff, C., Solimeno, C., Pruss, D., Eklund, A. C., Tóth, E., Kiss, O., Rusz, O., Cserni, G., Zombori, T., Székely, B., Tímár, J., Csabai, I. & Szallasi, Z., szept. 1 2018, In : Annals of Oncology. 29, 9, p. 1948-1954 7 p.

Research output: Article

Homologous Recombination
Brain Neoplasms
Breast Neoplasms
Neoplasm Metastasis
Neoplasms
1 Citation (Scopus)

Compactified cosmological simulations of the infinite universe

Rácz, G., Szapudi, I., Csabai, I. & Dobos, L., jún. 21 2018, In : Monthly Notices of the Royal Astronomical Society. 477, 2, p. 1949-1957 9 p.

Research output: Article

universe
simulation
boundary condition
spatial resolution
stereographic projection
38 Citations (Scopus)

Detecting and classifying lesions in mammograms with Deep Learning

Ribli, D., Horváth, A., Unger, Z., Pollner, P. & Csabai, I., dec. 1 2018, In : Scientific Reports. 8, 1, 4165.

Research output: Article

Neural networks
Image recognition
Mammography
Image analysis
Screening
2 Citations (Scopus)

Gene promoter and exon DNA methylation changes in colon cancer development - mRNA expression and tumor mutation alterations

Molnár, B., Galamb, O., Péterfia, B., Wichmann, B., Csabai, I., Bodor, A., Kalmár, A., Szigeti, K. A., Barták, B. K., Nagy, Z. B., Valcz, G., Patai, Á. V., Igaz, P. & Tulassay, Z., jún. 27 2018, In : BMC Cancer. 18, 1, 695.

Research output: Article

DNA Methylation
Colonic Neoplasms
Exons
p53 Genes
Methylation

GPU-accelerated hierarchical Bayesian estimation of luminosity functions using flux-limited observations with photometric noise

Szalai-Gindl, J. M., Loredo, T. J., Kelly, B. C., Csabai, I., Budavári, T. & Dobos, L., okt. 1 2018, In : Astronomy and Computing. 25, p. 247-256 10 p.

Research output: Article

Luminance
luminosity
Fluxes
Processing
Galaxies

Long-term treatment with the PARP inhibitor niraparib does not increase the mutation load in cell line models and tumour xenografts

Póti, Á., Berta, K., Xiao, Y., Pipek, O., Klus, G. T., Ried, T., Csabai, I., Wilcoxen, K., Mikule, K., Szallasi, Z. & Szüts, D., nov. 27 2018, In : British Journal of Cancer. 119, 11, p. 1392-1400 9 p.

Research output: Article

Tumor Cell Line
Heterografts
Mutation
Breast Neoplasms
Therapeutics
1 Citation (Scopus)

Migrating the SNP array-based homologous recombination deficiency measures to next generation sequencing data of breast cancer

Sztupinszki, Z., Diossy, M., Krzystanek, M., Reiniger, L., Csabai, I., Favero, F., Birkbak, N. J., Eklund, A. C., Syed, A. & Szallasi, Z., dec. 1 2018, In : npj Breast Cancer. 4, 1, 16.

Research output: Article

Homologous Recombination
Single Nucleotide Polymorphism
Breast Neoplasms
Cicatrix
Triple Negative Breast Neoplasms
1 Citation (Scopus)

New insights into the impact of primary lung adenocarcinoma location on metastatic sites and sequence: A multicenter cohort study

Klikovits, T., Lohinai, Z., Fábián, K., Gyulai, M., Szilasi, M., Varga, J., Baranya, E., Pipek, O., Csabai, I., Szállási, Z., Tímár, J., Hoda, M. A., Laszlo, V., Hegedűs, B., Renyi-Vamos, F., Klepetko, W., Ostoros, G., Döme, B. & Moldvay, J., dec. 1 2018, In : Lung Cancer. 126, p. 139-148 10 p.

Research output: Article

Multicenter Studies
Cohort Studies
Neoplasm Metastasis
Neoplasms
Disease Progression
2 Citations (Scopus)

The integrated Sachs-Wolfe Effect in the AvERA cosmology

Beck, R., Csabai, I., Rácz, G. & Szapudi, I., szept. 21 2018, In : Monthly Notices of the Royal Astronomical Society. 479, 3, p. 3582-3591 10 p.

Research output: Article

cosmology
power spectra
histories
Hubble constant
expansion
2017
1 Citation (Scopus)

Fermi GBM transient searches with ADWO

Bagoly, Z., Szécsi, D., Balázs, L., Csabai, I., Dobos, L., Horváth, I., Lichtenberger, J. & Tóth, L. V., jan. 1 2017, In : Contributions of the Astronomical Observatory Skalnate Pleso. 47, 2, p. 76-83 8 p.

Research output: Article

gamma ray bursts
gravitational waves
optimization
detectors
electromagnetism
1 Citation (Scopus)

Photo-z-SQL: Integrated, flexible photometric redshift computation in a database

Beck, R., Dobos, L., Budavári, T., Szalay, A. S. & Csabai, I., ápr. 1 2017, In : Astronomy and Computing. 19, p. 34-44 11 p.

Research output: Article

filter
filters
templates
caching
Covariance matrix
38 Citations (Scopus)

The association between germline BRCA2 variants and sensitivity to platinum-based chemotherapy among men with metastatic prostate cancer

Pomerantz, M. M., Spisák, S., Jia, L., Cronin, A. M., Csabai, I., Ledet, E., Sartor, A. O., Rainville, I., O'Connor, E. P., Herbert, Z. T., Szállási, Z., Oh, W. K., Kantoff, P. W., Garber, J. E., Schrag, D., Kibel, A. S. & Freedman, M. L., szept. 15 2017, In : Cancer. 123, 18, p. 3532-3539 8 p.

Research output: Article

Platinum
Prostatic Neoplasms
Carboplatin
Breast Neoplasms
Drug Therapy
2016
22 Citations (Scopus)

Aberrant DNA methylation of WNT pathway genes in the development and progression of CIMP-negative colorectal cancer

Galamb, O., Kalmár, A., Péterfia, B., Csabai, I., Bodor, A., Ribli, D., Krenács, T., Patai, Á. V., Wichmann, B., Barták, B. K., Tóth, K., Valcz, G., Spisák, S., Tulassay, Z. & Molnár, B., jún. 30 2016, (Accepted/In press) In : Epigenetics. p. 1-15 15 p.

Research output: Article

DNA Methylation
Colorectal Neoplasms
Adenoma
Genes
Methylation
50 Citations (Scopus)

A comprehensive survey of the mutagenic impact of common cancer cytotoxics

Szikriszt, B., PótiÁdám, Pipek, O., Krzystanek, M., Kanu, N., Molnár, J., Ribli, D., Szeltner, Z., Tusnády, G., Csabai, I., Szallasi, Z., Swanton, C. & Szüts, D., máj. 9 2016, In : Genome Biology. 17, p. 99 1 p.

Research output: Article

cisplatin
mutation
cancer
Cisplatin
mutagenesis
21 Citations (Scopus)

Loss of BRCA1 or BRCA2 markedly increases the rate of base substitution mutagenesis and has distinct effects on genomic deletions

Zámborszky, J., Szikriszt, B., Gervai, J. Z., Pipek, O., Póti, Krzystanek, M., Ribli, D., Szalai-Gindl, J. M., Csabai, I., Szallasi, Z., Swanton, C., Richardson, A. L. & Szüts, D., júl. 25 2016, (Accepted/In press) In : Oncogene.

Research output: Article

Methyl Methanesulfonate
Mutagenesis
Mutation
INDEL Mutation
BRCA2 Gene
45 Citations (Scopus)

Photometric redshifts for the SDSS Data Release 12

Beck, R., Dobos, L., Budavári, T., Szalay, A. S. & Csabai, I., 2016, In : Monthly Notices of the Royal Astronomical Society. 460, 2, p. 1371-1381 11 p.

Research output: Article

education
galaxies
catalogs
data bases
estimates
4 Citations (Scopus)

Quantifying correlations between galaxy emission lines and stellar continua

Beck, R., Dobos, L., Yip, C. W., Szalay, A. S. & Csabai, I., jan. 11 2016, In : Monthly Notices of the Royal Astronomical Society. 457, 1, p. 362-374 13 p.

Research output: Article

galaxies
continuums
stars
principal components analysis
principal component analysis
3 Citations (Scopus)

Race, religion and the city: Twitter word frequency patterns reveal dominant demographic dimensions in the United States

Bokányi, E., Kondor, D., Dobos, L., Sebők, T., Stéger, J., Csabai, I. & Vattay, G., jan. 1 2016, In : Palgrave Communications. 2, 16010.

Research output: Article

twitter
Religion
Demography
Language
language
15 Citations (Scopus)
LIGO (observatory)
gravitational waves
electromagnetism
optimization
detectors
2015
22 Citations (Scopus)

A novel genomic alteration of LSAMP associates with aggressive prostate cancer in African American men

Petrovics, G., Li, H., Stümpel, T., Tan, S. H., Young, D., Katta, S., Li, Q., Ying, K., Klocke, B., Ravindranath, L., Kohaar, I., Chen, Y., Ribli, D., Grote, K., Zou, H., Cheng, J., Dalgard, C. L., Zhang, S., Csabai, I., Kagan, J. & 14 others, Takeda, D., Loda, M., Srivastava, S., Scherf, M., Seifert, M., Gaiser, T., McLeod, D. G., Szallasi, Z., Ebner, R., Werner, T., Sesterhenn, I. A., Freedman, M., Dobi, A. & Srivastava, S., dec. 1 2015, In : EBioMedicine. 2, 12, p. 1957-1964 8 p.

Research output: Article

African Americans
Tumors
Prostatic Neoplasms
Genes
Genome
43 Citations (Scopus)

CAUSEL: An epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants

Spisák, S., Lawrenson, K., Fu, Y., Csabai, I., Cottman, R. T., Seo, J. H., Haiman, C., Han, Y., Lenci, R., Li, Q., Tisza, V., Szállási, Z., Herbert, Z. T., Chabot, M., Pomerantz, M., Solymosi, N., Gayther, S. A., Joung, J. K. & Freedman, M. L., nov. 1 2015, In : Nature Medicine. 21, 11, p. 1357-1363 7 p.

Research output: Article

Genome-Wide Association Study
Single Nucleotide Polymorphism
Pipelines
Genes
Cell Line
galaxies
continuums
stars
active galaxies
coefficients
18 Citations (Scopus)

Quantum criticality at the origin of life

Vattay, G., Salahub, D., Csabai, I., Nassimi, A. & Kaufmann, S. A., júl. 3 2015, In : Journal of Physics: Conference Series. 626, 1, 012023.

Research output: Article

insulators
metals
critical point
matrix theory
chaos
80 Citations (Scopus)

Do the rich get richer? An empirical analysis of the Bitcoin transaction network

Kondor, D., Pósfai, M., Csabai, I. & Vattay, G., febr. 5 2014, In : PLoS One. 9, 2, e86197.

Research output: Article

Scaling laws
statistics
Statistics
extracts
Cluster Analysis
19 Citations (Scopus)

Inferring the interplay between network structure and market effects in Bitcoin

Kondor, D., Csabai, I., Szüle, J., Pósfai, M. & Vattay, G., dec. 2 2014, In : New Journal of Physics. 16, 125003.

Research output: Article

digital systems
principal components analysis
lists
economics
histories
7 Citations (Scopus)

Lost in the city: Revisiting Milgram's experiment in the age of social networks

Szüle, J., Kondor, D., Dobos, L., Csabai, I. & Vattay, G., nov. 10 2014, In : PLoS One. 9, 11, e111973.

Research output: Article

social networks
Social Support
Fractals
Global positioning system
Navigation
12 Citations (Scopus)

Objective identification of informative wavelength regions in galaxy spectra

Yip, C. W., Mahoney, M. W., Szalay, A. S., Csabai, I., Budavári, T., Wyse, R. F. G. & Dobos, L., 2014, In : Astronomical Journal. 147, 5, 110.

Research output: Article

H lines
galaxies
wavelength
wavelengths
spectrographs
3 Citations (Scopus)

Strong random correlations in networks of heterogeneous agents

Kondor, I., Csabai, I., Papp, G., Mones, E., Czimbalmos, G. & Sándor, M. C., okt. 1 2014, In : Journal of Economic Interaction and Coordination. 9, 2, p. 203-232 30 p.

Research output: Article

Heterogeneous agents
Node
Numerical simulation
Graph
Systemic risk
10 Citations (Scopus)

The genome of the chicken DT40 bursal lymphoma cell line

Molnár, J., Póti, Á., Pipek, O., Krzystanek, M., Kanu, N., Swanton, C., Tusnády, G., Szallasi, Z., Csabai, I. & Szüts, D., nov. 1 2014, In : G3: Genes, Genomes, Genetics. 4, 11, p. 2231-2240 10 p.

Research output: Article

Chickens
Lymphoma
Genome
Cell Line
Avian Leukosis Virus
2013
25 Citations (Scopus)

Complete Genes May Pass from Food to Human Blood

Spisák, S., Solymosi, N., Ittzés, P., Bodor, A., Kondor, D., Vattay, G., Barták, B. K., Sípos, F., Galamb, O., Tulassay, Z., Szállási, Z., Rasmussen, S., Sicheritz-Ponten, T., Brunak, S., Molnár, B. & Csabai, I., júl. 30 2013, In : PLoS One. 8, 7, e69805.

Research output: Article

Plant DNA
Blood
Genes
Food
DNA
1 Citation (Scopus)

Measuring the dimension of partially embedded networks

Kondor, D., Mátray, P., Csabai, I. & Vattay, G., szept. 15 2013, In : Physica A: Statistical Mechanics and its Applications. 392, 18, p. 4160-4171 12 p.

Research output: Article

Scaling
Complex Networks
Spectral Dimension
Information Measure
Large-scale Structure
4 Citations (Scopus)

Photo-Met: A non-parametric method for estimating stellar metallicity from photometric observations

Kerekes, G., Csabai, I., Dobos, L. & Trencséni, M., nov. 2013, In : Astronomische Nachrichten. 334, 9, p. 1012-1015 4 p.

Research output: Article

metallicity
estimating
stars
signal-to-noise ratio
estimates
1 Citation (Scopus)

Refined position angle measurements for galaxies of the SDSS Stripe 82 co-added dataset

Varga, J., Csabai, I. & Dobos, L., nov. 2013, In : Astronomische Nachrichten. 334, 9, p. 1016-1019 4 p.

Research output: Article

galaxies
catalogs
brightness
profiles
code
2012
21 Citations (Scopus)

A high-resolution atlas of composite Sloan Digital Sky Survey galaxy spectra

Dobos, L., Csabai, I., Yip, C. W., Budavári, T., Wild, V. & Szalay, A. S., febr. 2012, In : Monthly Notices of the Royal Astronomical Society. 420, 2, p. 1217-1238 22 p.

Research output: Article

atlas
galaxies
composite materials
high resolution
spectrographs
26 Citations (Scopus)

Genome-Wide Screening of Genes Regulated by DNA Methylation in Colon Cancer Development

Spisák, S., Kalmár, A., Galamb, O., Wichmann, B., Sípos, F., Péterfia, B., Csabai, I., Kovalszky, I., Semsey, S., Tulassay, Z. & Molnár, B., okt. 1 2012, In : PLoS One. 7, 10, e46215.

Research output: Article

DNA methylation
DNA Methylation
colorectal neoplasms
Colonic Neoplasms
Screening
12 Citations (Scopus)

On the spatial properties of internet routes

Mátray, P., Hága, P., Laki, S., Vattay, G. & Csabai, I., jún. 14 2012, In : Computer Networks. 56, 9, p. 2237-2248 12 p.

Research output: Article

Internet
Topology
Routers
12 Citations (Scopus)

RCUR: An R package for CUR matrix decomposition

Bodor, A., Csabai, I., Mahoney, M. W. & Solymosi, N., máj. 17 2012, In : BMC Bioinformatics. 13, 1, 103.

Research output: Article

Matrix Decomposition
Gene Expression
Internet
Regression Analysis
Technology
stacking
active galactic nuclei
radio
point sources
sky
2011
11 Citations (Scopus)
Arsenic
Phosphorus
Nucleic Acids
Bacteria
Research
5 Citations (Scopus)

Correlations between nebular emission and the continuum spectral shape in SDSS galaxies

Gyory, Z., Szalay, A. S., Budavári, T., Csabai, I. & Charlot, S., ápr. 2011, In : Astronomical Journal. 141, 4, 133.

Research output: Article

galaxies
continuums
principal components analysis
principal component analysis
method
7 Citations (Scopus)

Order statistics of the early-type galaxy luminosity function

Dobos, L. & Csabai, I., júl. 2011, In : Monthly Notices of the Royal Astronomical Society. 414, 3, p. 1862-1874 13 p.

Research output: Article

luminosity
statistics
galaxies
distribution
reversing
2010
25 Citations (Scopus)

A model based approach for improving router geolocation

Laki, S., Mátray, P., Hága, P., Csabai, I. & Vattay, G., jún. 17 2010, In : Computer Networks. 54, 9, p. 1490-1501 12 p.

Research output: Article

Routers
Topology
Experiments

Bayesian approach for matching multiple stellar observations

Kerekes, G., Budavári, T. & Csabai, I., 2010, In : Journal of Physics: Conference Series. 218, 1, 012012.

Research output: Article

stars
static models
proper motion
astronomy
catalogs
13 Citations (Scopus)

Cross identification of stars with unknown proper motions

Kerekes, G., Budavári, T., Csabai, I., Connolly, A. J. & Szalay, A. S., aug. 10 2010, In : Astrophysical Journal. 719, 1, p. 59-66 8 p.

Research output: Article

proper motion
stars
static models
dark energy
astronomy
20 Citations (Scopus)

Extinction in star-forming disk galaxies from inclination-dependent composite spectra

Yip, C. W., Szalay, A. S., Wyse, R. F. G., Dobos, L., Budavri, T. & Csabai, I., 2010, In : Astrophysical Journal. 709, 2, p. 780-790 11 p.

Research output: Article

disk galaxies
inclination
extinction
stars
composite materials