• 5022 Citations
  • 25 h-Index
19942019
If you made any changes in Pure these will be visible here soon.

Research Output 1994 2019

  • 5022 Citations
  • 25 h-Index
  • 50 Article
  • 4 Chapter
  • 1 Comment/debate
Filter
Article
2019

Covalently modified carboxyl side chains on cell surface leads to a novel method toward topology analysis of transmembrane proteins

Müller, A., Langó, T., Turiák, L., Ács, A., Várady, G., Kucsma, N., Drahos, L. & Tusnády, G. E., dec. 1 2019, In : Scientific reports. 9, 1, 15729.

Research output: Article

Open Access
Proteins
Peptide Fragments
Computational Biology
Proteolysis
Membrane Proteins
2 Citations (Scopus)
Open Access
Intrinsically Disordered Proteins
Proteins
Biological Phenomena
Post Translational Protein Processing

The TMCrys server for supporting crystallization of transmembrane proteins

Varga, J. K., Tusnády, G. E. & Valencia, A., okt. 15 2019, In : Bioinformatics. 35, 20, p. 4203-4204 2 p.

Research output: Article

Open Access
Membrane Protein
Crystallization
Membrane Proteins
Servers
Server
2018
7 Citations (Scopus)

NGS of virus-derived small RNAs as a diagnostic method used to determine viromes of Hungarian Vineyards

Czotter, N., Molnar, J., Szabó, E., Demian, E., Kontra, L., Baksa, I., Szittya, G., Kocsis, L., Deak, T., Bisztray, G., Tusnády, G., Burgyán, J. & Várallyay, E., febr. 6 2018, In : Frontiers in Microbiology. 9, FEB, 122.

Research output: Article

RNA
Viruses
Hungary
High-Throughput Nucleotide Sequencing
Metagenomics
2 Citations (Scopus)

Small RNA NGS revealed the presence of cherry virus A and little cherry virus 1 on apricots in hungary

Baráth, D., Jaksa-Czotter, N., Molnár, J., Varga, T., Balássy, J., Szabó, L. K., Kirilla, Z., Tusnády, G., Preininger, É. & Várallyay, E., jún. 11 2018, In : Viruses. 10, 6, 318.

Research output: Article

Hungary
RNA
Viruses
RNA Sequence Analysis
Metagenomics
1 Citation (Scopus)

Structural Principles Governing Disease-Causing Germline Mutations

Dobson, L., Mészáros, B. & Tusnády, G., jan. 1 2018, (Accepted/In press) In : Journal of Molecular Biology.

Research output: Article

Germ-Line Mutation
Mutation
Proteome
Post Translational Protein Processing
Molecular Structure
1 Citation (Scopus)

TMCrys: Predict propensity of success for transmembrane protein crystallization

Varga, J. K. & Tusnády, G., jan. 1 2018, In : Bioinformatics. 34, 18, p. 3126-3130 5 p.

Research output: Article

Open Access
Crystallization
Proteins
Protein
Predict
Prediction
2017
2 Citations (Scopus)

TSTMP: Target selection for structural genomics of human transmembrane proteins

Varga, J., Dobson, L., Reményi, I. & Tusnády, G., jan. 1 2017, In : Nucleic Acids Research. 45, D1, p. D325-D330

Research output: Article

Genomics
Databases
Proteins
Proteome
Protein Transport
2016
64 Citations (Scopus)

A comprehensive survey of the mutagenic impact of common cancer cytotoxics

Szikriszt, B., PótiÁdám, Pipek, O., Krzystanek, M., Kanu, N., Molnár, J., Ribli, D., Szeltner, Z., Tusnády, G., Csabai, I., Szallasi, Z., Swanton, C. & Szüts, D., máj. 9 2016, In : Genome Biology. 17, p. 99 1 p.

Research output: Article

cisplatin
mutation
cancer
Cisplatin
mutagenesis
3 Citations (Scopus)
Molecular Pathology
Paraffin
Formaldehyde
High-Throughput Nucleotide Sequencing
Mutation
12 Citations (Scopus)

Characterization of Disease-Associated Mutations in Human Transmembrane Proteins

Molnár, J., Szakács, G. & Tusnády, G., jan. 1 2016, In : PLoS One. 11, 3, p. e0151760

Research output: Article

transmembrane proteins
mutation
Mutation
Amino Acids
amino acids
2015
104 Citations (Scopus)

CCTOP: a Consensus Constrained TOPology prediction web server

Dobson, L., Reményi, I. & Tusnády, G., júl. 1 2015, In : Nucleic Acids Research. 43, W1, p. W408-W412

Research output: Article

Protein Sorting Signals
Proteins
Databases
13 Citations (Scopus)

Disordered regions in transmembrane proteins

Tusnády, G., Dobson, L. & Tompa, P., nov. 15 2015, In : BBA - Biomembranes. 1848, 11, p. 2839-2848 10 p.

Research output: Article

Proteins
Spatial distribution
Cell adhesion
Cell Adhesion
Head
21 Citations (Scopus)

Expediting topology data gathering for the TOPDB database

Dobson, L., Langó, T., Reményi, I. & Tusnády, G., jan. 28 2015, In : Nucleic Acids Research. 43, D1, p. D283-D289

Research output: Article

Databases
Proteins
Glycosylation
19 Citations (Scopus)

Role of the N-terminal transmembrane domain in the endo-lysosomal targeting and function of the human ABCB6 protein

Kiss, K., Kucsma, N., Brozik, A., Tusnády, G., Bergam, P., Van Niel, G. & Szakács, G., ápr. 1 2015, In : Biochemical Journal. 467, 1, p. 127-139 13 p.

Research output: Article

Cell membranes
Cell Membrane
Lysosomes
Adenosine Triphosphate
Multivesicular Bodies
32 Citations (Scopus)

The human transmembrane proteome

Dobson, L., Reményi, I. & Tusnády, G., máj. 28 2015, (Accepted/In press) In : Biology Direct.

Research output: Article

Proteome
proteome
topology
Topology
transmembrane proteins
6 Citations (Scopus)
Membrane Potentials
Fold
Proteins
Protein
Proteome
5 Citations (Scopus)

TMFoldWeb: A web server for predicting transmembrane protein fold class

Kozma, D. & Tusnády, G., szept. 17 2015, In : Biology Direct. 10, 1, 54.

Research output: Article

transmembrane proteins
Web Server
Fold
Servers
fold
2014
11 Citations (Scopus)

The genome of the chicken DT40 bursal lymphoma cell line

Molnár, J., Póti, Á., Pipek, O., Krzystanek, M., Kanu, N., Swanton, C., Tusnády, G., Szallasi, Z., Csabai, I. & Szüts, D., nov. 1 2014, In : G3: Genes, Genomes, Genetics. 4, 11, p. 2231-2240 10 p.

Research output: Article

Chickens
Lymphoma
Genome
Cell Line
Avian Leukosis Virus
2013
119 Citations (Scopus)
Databases
Proteins
Lipid Bilayers
Membranes
2012
13 Citations (Scopus)
Web Browser
Benchmarking
Sequence Alignment
Amino Acid Sequence
Proteins
2010
1 Citation (Scopus)

methGraph: A genome visualization tool for PCR-based methylation assays

Lefever, S., Hoebeeck, J., Pattyn, F., Tusnády, G., de Paepe, A., Speleman, F., Arányi, T. & Vandesompele, J., febr. 2010, In : Epigenetics. 5, 2, p. 159-163 5 p.

Research output: Article

Methylation
DNA Methylation
Genome
Polymerase Chain Reaction
CpG Islands
27 Citations (Scopus)
Topology
Proteins
Membrane Proteins
Learning systems
Genome
2009
20 Citations (Scopus)
Phosphate Transport Proteins
Viruses
Feline Leukemia Virus
Mutagenesis
Cysteine
2008
57 Citations (Scopus)
Databases
Proteins
Protein Databases
Internet
Names
21 Citations (Scopus)
Databases
Proteins
Protein
Membrane
Membranes
2006
57 Citations (Scopus)

Membrane topology of human ABC proteins

Tusnády, G., Sarkadi, B., Simon, I. & Váradi, A., febr. 13 2006, In : FEBS Letters. 580, 4, p. 1017-1022 6 p.

Research output: Article

Topology
Membranes
Proteins
ATP-Binding Cassette Transporters
Guidelines
57 Citations (Scopus)

The BiSearch web server

Arányi, T., Váradi, A., Simon, I. & Tusnády, G., okt. 5 2006, In : BMC Bioinformatics. 7, 431.

Research output: Article

Web Server
DNA
Servers
Electronics
Template
2005
110 Citations (Scopus)
Cytosine
Genome
Polymerase Chain Reaction
Software Design
Thymine
217 Citations (Scopus)
Protein Databases
Databases
Membranes
Proteins
Lipid Bilayers
96 Citations (Scopus)

SRide: A server for identifying stabilizing residues in proteins

Magyar, C., Gromiha, M. M., Pujadas, G., Tusnády, G. & Simon, I., júl. 2005, In : Nucleic Acids Research. 33, SUPPL. 2

Research output: Article

Proteins
Protein Engineering
Hydrophobic and Hydrophilic Interactions
100 Citations (Scopus)
Web Server
Membrane
Servers
Proteins
Membranes
2004
174 Citations (Scopus)
Databases
Proteins
Protein
Lipid Bilayer
Membrane Protein
2003
324 Citations (Scopus)

PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

Gardy, J. L., Spencer, C., Wang, K., Ester, M., Tusnády, G. E., Simon, I., Hua, S., deFays, K., Lambert, C., Nakai, K. & Brinkman, F. S. L., júl. 1 2003, In : Nucleic Acids Research. 31, 13, p. 3613-3617 5 p.

Research output: Article

Gram-Negative Bacteria
Bacterial Proteins
Proteins
Drug Discovery
Licensure
93 Citations (Scopus)
Polypeptides
Protein Structure
Peptides
Stabilization
Server
9 Citations (Scopus)

Servers for sequence-structure relationship analysis and prediction

Dosztányi, Z., Magyar, C., Tusnády, G. E., Cserzo, M., Fiser, A. & Simon, I., júl. 1 2003, In : Nucleic Acids Research. 31, 13, p. 3359-3363 5 p.

Research output: Article

amsonic acid
Protein Databases
Protein Stability
Cysteine
Proteins
2002
43 Citations (Scopus)

The role of dimerization in prion replication

Tompa, P., Tusnády, G., Friedrich, P. & Simon, I., 2002, In : Biophysical Journal. 82, 4, p. 1711-1718 8 p.

Research output: Article

Scrapie
Prions
Dimerization
Polymerization
Disulfides
2001
15 Citations (Scopus)
Protein Conformation
Conformations
Statistical methods
Protein folding
Proteins
30 Citations (Scopus)

Prion protein: Evolution caught en route

Tompa, P., Tusnády, G., Cserzo, M. & Simon, I., ápr. 10 2001, In : Proceedings of the National Academy of Sciences of the United States of America. 98, 8, p. 4431-4436 6 p.

Research output: Article

Prions
Extracellular Space
Vertebrates
Membrane Proteins
Proteins
1363 Citations (Scopus)

The HMMTOP transmembrane topology prediction server

Tusnády, G. & Simon, I., 2001, In : Bioinformatics. 17, 9, p. 849-850 2 p.

Research output: Article

Epitopes
Servers
Server
Topology
Prediction
33 Citations (Scopus)

Topology of membrane proteins

Tusnády, G. & Simon, I., márc. 2001, In : Journal of Chemical Information and Computer Sciences. 41, 2, p. 364-368 5 p.

Research output: Article

Membrane Proteins
Topology
Proteins
Membranes
role play
2000
89 Citations (Scopus)
P-Glycoproteins
Membranes
Sf9 Cells
Glutathione
Nucleotides
1999
242 Citations (Scopus)

Functional multidrug resistance protein (MRP1) lacking the N-terminal transmembrane domain

Bakos, E., Evers, R., Szakács, G., Tusnády, G., Welker, E., Szabó, K., De Haas, M., Van Deemter, L., Borst, P., Váradi, A. & Sarkadi, B., nov. 27 1999, In : Journal of Biological Chemistry. 273, 48, p. 32167-32175 9 p.

Research output: Article

P-Glycoproteins
Leukotriene C4
Vanadates
Glutathione
Nucleotides
1998
3 Citations (Scopus)
Multidrug Resistance-Associated Proteins
ATP-Binding Cassette Transporters
Topology
Proteins
Membranes
909 Citations (Scopus)
Membrane Proteins
Amino Acids
Proteins
5 Citations (Scopus)

Short MRP may not be short

Tusnády, G. & Váradi, A., jan. 26 1998, In : Biochemical and Biophysical Research Communications. 242, 3, p. 465-466 2 p.

Research output: Article

1997
211 Citations (Scopus)
Multidrug Resistance-Associated Proteins
ATP-Binding Cassette Transporters
Topology
Membranes
Cystic Fibrosis Transmembrane Conductance Regulator
1996
190 Citations (Scopus)
Glycosylation
Multidrug Resistance-Associated Proteins
Topology
Membranes
Proteolysis
1995
7 Citations (Scopus)
Binary trees
Amino acids
Amino Acids
Proteins
Protein Engineering
1994
62 Citations (Scopus)

Chaos game representation of protein structures

Fiser, A., Tusnády, G. & Simon, I., 1994, In : Journal of Molecular Graphics. 12, 4, p. 302-304 3 p.

Research output: Article

Secondary Protein Structure
Protein Databases
games
Chaos theory
chaos