Severed molecules functionally define the boundaries of the cystic fibrosis transmembrane conductance regulator's NH2-terminal nucleotide binding domain

K. W. Chan, L. Csanády, D. Seto-Young, A. C. Nairn, D. C. Gadsby

Research output: Contribution to journalArticle

64 Citations (Scopus)

Abstract

The cystic fibrosis transmembrane conductance regulator is a Cl- channel that belongs to the family of ATP-binding cassette proteins. The CFTR polypeptide comprises two transmembrane domains, two nucleotide binding domains (NBD1 and NBD2), and a regulatory (R) domain. Gating of the channel is controlled by kinase-mediated phosphorylation of the R domain and by ATP binding, and, likely, hydrolysis at the NBDs. Exon 13 of the CFTR gene encodes amino acids (aa's) 590-830, which were originally ascribed to the R domain. In this study, CFTR channels were severed near likely NH2- or COOH-terminal boundaries of NBD1. CFTR channel activity, assayed using two-microelectrode voltage clamp and excised patch recordings, provided a sensitive measure of successful assembly of each pair of channel segments as the sever point was systematically shifted along the primary sequence. Substantial channel activity was taken as an indication that NBD1 was functionally intact. This approach revealed that the COOH terminus of NBD1 extends beyond aa 590 and lies between aa's 622 and 634, while the NH2 terminus of NBD1 lies between aa's 432 and 449. To facilitate biochemical studies of the expressed proteins, a Flag epitope was added to the NH2 termini of full length CFTR, and of CFTR segments truncated before the normal COOH terminus (aa 1480). The functionally identified NBD1 boundaries are supported by Western blotting, coimmunoprecipitation, and deglycosylation studies, which showed that an NH2-terminal segment representing aa's 3-622 (Flag3-622) or 3-633 (Flag3-633) could physically associate with a COOH-terminal fragment representing aa's 634-1480 (634-1480); however, the latter fragment was glycosylated to the mature form only in the presence of Flag3-633. Similarly, 433-1480 could physically associate with Flag3-452 and was glycosylated to the mature form; however, 449-1480 protein seemed unstable and could hardly be detected even when expressed with Flag3-432. In excised-patch recordings, all functional severed CFTR channels displayed the hallmark characteristics of CFTR, including the requirement of phosphorylation and exposure to MgATP for gating, ability to be locked open by pyrophosphate or AMP-PNP, small single channel conductances, and high apparent affinity of channel opening by MgATP. Our definitions of the boundaries of the NBD1 domain in CFTR are supported by comparison with the solved NBD structures of HisP and RbsA.

Original languageEnglish
Pages (from-to)163-180
Number of pages18
JournalJournal of General Physiology
Volume116
Issue number2
DOIs
Publication statusPublished - 2000

Fingerprint

Cystic Fibrosis Transmembrane Conductance Regulator
Nucleotides
Amino Acids
Adenosine Triphosphate
Phosphorylation
Adenylyl Imidodiphosphate
Microelectrodes
Epitopes
Exons
Carrier Proteins
Proteins
Hydrolysis
Phosphotransferases
Western Blotting
Peptides
Genes

Keywords

  • Adenosine triphosphate-binding cassette transporter
  • Chloride channel
  • Coimmunoprecipitation
  • Domain structure
  • Gating kinetics

ASJC Scopus subject areas

  • Physiology

Cite this

Severed molecules functionally define the boundaries of the cystic fibrosis transmembrane conductance regulator's NH2-terminal nucleotide binding domain. / Chan, K. W.; Csanády, L.; Seto-Young, D.; Nairn, A. C.; Gadsby, D. C.

In: Journal of General Physiology, Vol. 116, No. 2, 2000, p. 163-180.

Research output: Contribution to journalArticle

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KW - Domain structure

KW - Gating kinetics

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