"Pull Moves" for rectangular lattice polymer models are not fully reversible

Dániel Györffy, P. Závodszky, András Szilágyi

Research output: Contribution to journalArticle

4 Citations (Scopus)

Abstract

"Pull moves" is a popular move set for lattice polymer model simulations. We show that the proof given for its reversibility earlier is flawed, and some moves are irreversible, which leads to biases in the parameters estimated from the simulations. We show how to make the move set fully reversible.

Original languageEnglish
Pages (from-to)1847-1849
Number of pages3
JournalIEEE/ACM Transactions on Computational Biology and Bioinformatics
Volume9
Issue number6
DOIs
Publication statusPublished - 2012

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Polymers
Reversibility
Simulation Model
Model
Simulation

Keywords

  • HP model
  • Lattice model
  • Pull moves

ASJC Scopus subject areas

  • Biotechnology
  • Genetics
  • Applied Mathematics
  • Medicine(all)

Cite this

"Pull Moves" for rectangular lattice polymer models are not fully reversible. / Györffy, Dániel; Závodszky, P.; Szilágyi, András.

In: IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 9, No. 6, 2012, p. 1847-1849.

Research output: Contribution to journalArticle

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