Looking for breed differentiating SNP loci and for a SNP set for parentage testing in Mangalica

Attila Zsolnai, Gábor Tóth, János Molnár, Viktor Stéger, Ferenc Marincs, Anna Jánosi, Gabriella Ujhelyi, Erika Koppányné Szabó, Anita Mohr, István Anton, Réka Szántó-Egész, Rita Sipos, István Egerszegi, Klára Dallmann, Péter Tóth, Adrienn Micsinai, Klaus Peter Brüssow, József Rátky

Research output: Contribution to journalArticle

4 Citations (Scopus)

Abstract

The whole genome of Mangalica animals has been screened on the Illumina porcine chip giving the possibility (1) to replace the previously applied ten microsatellite markers by nine SNP loci to classify the Blond, Swallow-Belly and Red Mangalica individuals into three different breed groups (P>0.95); (2) to propose 54 SNP loci for parentage testing in Mangalica pigs where the exclusion probability is 0.999115 if one parent is known and the probability of identity is 1.54×10-23.

Original languageEnglish
Pages (from-to)200-207
Number of pages8
JournalArchiv Tierzucht
Volume56
Issue number1
DOIs
Publication statusPublished - Feb 1 2014

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Keywords

  • Breed differentiation
  • Genome wide screening
  • Parentage testing
  • SNP

ASJC Scopus subject areas

  • Food Animals
  • Animal Science and Zoology

Cite this

Zsolnai, A., Tóth, G., Molnár, J., Stéger, V., Marincs, F., Jánosi, A., Ujhelyi, G., Szabó, E. K., Mohr, A., Anton, I., Szántó-Egész, R., Sipos, R., Egerszegi, I., Dallmann, K., Tóth, P., Micsinai, A., Brüssow, K. P., & Rátky, J. (2014). Looking for breed differentiating SNP loci and for a SNP set for parentage testing in Mangalica. Archiv Tierzucht, 56(1), 200-207. https://doi.org/10.7482/0003-9438-56-019