Crystallization and preliminary crystallographic analysis of an Escherichia coli-selected mutant of the nuclease domain of the metallonuclease colicin E7

Anikó Czene, Eszter Tóth, B. Gyurcsik, Harm Otten, Jens Christian N Poulsen, Leila Lo Leggio, Sine Larsen, Hans E M Christensen, Kyosuke Nagata

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

The metallonuclease colicin E7 is a member of the HNH family of endonucleases. It serves as a bacterial toxin in Escherichia coli, protecting the host cell from other related bacteria and bacteriophages by degradation of their chromosomal DNA under environmental stress. Its cell-killing activity is attributed to the nonspecific nuclease domain (NColE7), which possesses the catalytic ββα-type metal ion-binding HNH motif at its C-terminus. Mutations affecting the positively charged amino acids at the N-terminus of NColE7 (444-576) surprisingly showed no or significantly reduced endonuclease activity [Czene et al. (2013), J. Biol. Inorg. Chem. 18, 309-321]. The necessity of the N-terminal amino acids for the function of the C-terminal catalytic centre poses the possibility of allosteric activation within the enzyme. Precise knowledge of the intramolecular interactions of these residues that affect the catalytic activity could turn NColE7 into a novel platform for artificial nuclease design. In this study, the N-terminal deletion mutant ΔN4-NColE7-C*of the nuclease domain of colicin E7 selected by E. coli was overexpressed and crystallized at room temperature by the sitting-drop vapour-diffusion method. X-ray diffraction data were collected to 1.6 Å resolution and could be indexed and averaged in the trigonal space group P3121 or P3221, with unit-cell parameters a = b = 55.4, c = 73.1 Å. Structure determination by molecular replacement is in progress.

Original languageEnglish
Pages (from-to)551-554
Number of pages4
JournalActa Crystallographica Section F: Structural Biology and Crystallization Communications
Volume69
Issue number5
DOIs
Publication statusPublished - May 2013

Fingerprint

nuclease
Colicins
Endonucleases
Escherichia
Crystallization
Escherichia coli
crystallization
Bacterial Toxins
Amino Acids
Bacteriophages
amino acids
cells
Metal ions
bacteriophages
Catalyst activity
Bacteria
deletion
Enzyme Activation
Chemical activation
Vapors

Keywords

  • colicin E7
  • metallonucleases
  • nuclease domain

ASJC Scopus subject areas

  • Biochemistry
  • Biophysics
  • Structural Biology
  • Genetics
  • Condensed Matter Physics

Cite this

Crystallization and preliminary crystallographic analysis of an Escherichia coli-selected mutant of the nuclease domain of the metallonuclease colicin E7. / Czene, Anikó; Tóth, Eszter; Gyurcsik, B.; Otten, Harm; Poulsen, Jens Christian N; Lo Leggio, Leila; Larsen, Sine; Christensen, Hans E M; Nagata, Kyosuke.

In: Acta Crystallographica Section F: Structural Biology and Crystallization Communications, Vol. 69, No. 5, 05.2013, p. 551-554.

Research output: Contribution to journalArticle

Czene, Anikó ; Tóth, Eszter ; Gyurcsik, B. ; Otten, Harm ; Poulsen, Jens Christian N ; Lo Leggio, Leila ; Larsen, Sine ; Christensen, Hans E M ; Nagata, Kyosuke. / Crystallization and preliminary crystallographic analysis of an Escherichia coli-selected mutant of the nuclease domain of the metallonuclease colicin E7. In: Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 2013 ; Vol. 69, No. 5. pp. 551-554.
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AU - Tóth, Eszter

AU - Gyurcsik, B.

AU - Otten, Harm

AU - Poulsen, Jens Christian N

AU - Lo Leggio, Leila

AU - Larsen, Sine

AU - Christensen, Hans E M

AU - Nagata, Kyosuke

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