Atropisomerism of the Asn α radicals revealed by ramachandran surface topology

Klára Z. Gerlei, Imre Jákli, Milán Szori, Svend J.Knak Jensen, Béla Viskolcz, Imre G. Csizmadia, András Perczel

Research output: Contribution to journalArticle

6 Citations (Scopus)

Abstract

C radicals are typically trigonal planar and thus achiral, regardless of whether they originate from a chiral or an achiral C-atom (e.g., C-H + OH → C• + H2O). Oxidative stress could initiate radical formation in proteins when, for example, the H-atom is abstracted from the Cα-carbon of an amino acid residue. Electronic structure calculations show that such a radical remains achiral when formed from the achiral Gly, or the chiral but small Ala residues. However, when longer side-chain containing proteogenic amino acid residues are studied (e.g., Asn), they provide radicals of axis chirality, which in turn leads to atropisomerism observed for the first time for peptides. The two enantiomeric extended backbone structures, •βL and •βD, interconvert via a pair of enantiotopic reaction paths, monitored on a 4D Ramachandran surface, with two distinct transition states of very different Gibbs-free energies: 37.4 and 67.7 kJ/mol, respectively. This discovery requires the reassessment of our understanding on radical formation and their conformational and stereochemical behavior. Furthermore, the atropisomerism of proteogenic amino acid residues should affect our understanding on radicals in biological systems and, thus, reframes the role of the D-residues as markers of molecular aging.

Original languageEnglish
Pages (from-to)12402-12409
Number of pages8
JournalJournal of Physical Chemistry B
Volume117
Issue number41
DOIs
Publication statusPublished - Oct 17 2013

ASJC Scopus subject areas

  • Physical and Theoretical Chemistry
  • Surfaces, Coatings and Films
  • Materials Chemistry

Fingerprint Dive into the research topics of 'Atropisomerism of the Asn α radicals revealed by ramachandran surface topology'. Together they form a unique fingerprint.

  • Cite this